PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_33244_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family C2H2
Protein Properties Length: 99aa    MW: 10637.4 Da    PI: 8.0603
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_33244_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00098220523
                                         TTTEEESSHHHHHHHHHHT CS
                              zf-C2H2  5 dCgksFsrksnLkrHirtH 23
                                         dCg+ Fsr++++ +H   +
  cra_locus_33244_iso_1_len_294_ver_3  2 DCGTLFSRRDSFITHRAFC 20
                                         8**************8765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
XDCGTLFSRR DSFITHRAFC DALAEESART ISGNPLLSSQ SAIAMAPSSS SSSASQFIFS  60
MKKEQQTFNL RPEIPPWLAC PNRNPNPNSG PGPGPPSMX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072643.14e-30PREDICTED: zinc finger protein NUTCRACKER-like, partial
SwissprotQ8H1F51e-15IDD7_ARATH; Protein indeterminate-domain 7
TrEMBLA0A068TNU15e-30A0A068TNU1_COFCA; Uncharacterized protein
STRINGVIT_04s0008g01160.t014e-28(Vitis vinifera)